PUBLICATIONS

Lab Members in Bold, italics indicates equal contribution, TITLES UNDERLINED

 

  1. McGregor JN, Farris CA, Ensley S, Schneider A, Wang C, Tilden EI, Liu Y, Tu J, Elmore H, Ronayne KD, Wessel R, Dyer EL, Bhaskaran-Nair K, Holtzman DM, Hengen KB. (2024). Failure in a population: Tauopathy disrupts homeostatic set-points in emergent dynamics despite stability in the constituent neurons. (Paper)

  2. Parks DF, Schneider A, Xu Y, Brunwasser SJ, Funderburk S, Thurber D, Blanche R, Dyer EL, Haussler D, Hengen KB. (2024). A nonoscillatory, millisecond-scale embedding of brain state provides insight into behavior. (Paper)

  3. Xu, Y., Schneider, A., Wessel, R., & Hengen, K. B. (2024). Sleep restores an optimal computational regime in Cortical Networks. https://doi.org/10.1101/2022.12.07.519478 (Paper)

  4. Schneider A, Azabou M, McDougall-Vigier L, Parks DF, Ensley S, Bhaskaran-Nair K, Nowakowski TJ, Dyer EL, Hengen KB. (2023). Transcriptomic cell type structures in vivo neuronal activity across multiple time scales. (Paper)

  5. Brunwasser, S. J., Farris, C., Elmore, H., Dyer, E. L., Nair, K. B., Whitesell, J. D., Harris, J. A., & Hengen, K. B. (2022). Circuit-specific selective vulnerability in the DMN persists in the face of widespread amyloid burden. https://doi.org/10.1101/2022.11.14.516510 (Preprint)

  6. Parks DF, Voitiuk K, Geng J, Elliott MAT, Keefe MG, Jung EA, Robbins A, Baudin PV, Ly VT, Hawthorne N, Yong D, Sanso SE, Rezaee N, Sevetson J, Seiler ST, Currie R, Pollen AA, Hengen KB, Nowakowski TJ, Mostajo-Radji MA, Salama SR, Teodorescu M, Haussler D. (2022). Internet of Things Architecture for Cellular Biology. (Paper)

  7. N. Ahad, E.L. Dyer, K.B. Hengen, Y. Xie, M.A. Davenport: Learning Sinkhorn divergences for supervised change point detection, arXiv:2202.04000, (Preprint)

  8. M. Azabou, M. Dabagia, R. Liu, C-H Lin, K.B. Hengen, E.L. Dyer: Using self-supervision and augmentations to build insights into neural coding, Neural Information Processing Systems (NeurIPS), Workshop on Self-supervised Learning: Theory and Practice, Dec 2021 (Paper)

  9. M. Azabou, M. Gheshlaghi Azar, R. Liu, C-H. Lin, E.C. Johnson, K. Bhaskharan-Nair, M. Dabagia, K.B. Hengen, W. Gray-Roncal, M. Valko, E.L. Dyer, Mine Your Own vieW: Self-supervised learning through across-sample prediction, Neural Information Processing Systems (NeurIPS), Workshop on Self-supervised Learning: Theory and Practice Feb 2021 (Preprint, Code)

  10. R. Liu, M. Azabou, M. Dabagia, C-H. Lin, M. Gheshlaghi Azar, K.B. Hengen, M. Valko, E.L. Dyer. Drop, Swap, and Generate: A Self-Supervised Approach for Generating Neural Activity, Neural Information Processing Systems (NeurIPS), Dec 2021 (Paper, Code)

  11. Chen J, Lambo ME, Ge X, Dearborn JT, Liu Y, McCullough KB, Swift RG, Tabachnick DR, Tian L, Noguchi K, Garbow JR, Constantino JN, Gabel HW, Hengen KB, Maloney SE, Dougherty JD(2021). A MYT1L syndrome mouse model recapitulates patient phenotypes and reveals altered brain development due to disrupted neuronal maturation. Neuron. 109(23):3775-3792.e14. doi: 10.1016/j.neuron.2021.09.009. (Paper)

  12. Popova G, Soliman SS, Kim CN, Keefe MG, Hennick KM, Jain S, Li T, Tejera D, Shin D, Chhun BB, McGinnis CS, Speir M, Gartner ZJ, Mehta SB, Haeussler M, Hengen KB, Ransohoff RR, Piao X, Nowakowski TJ (2021). Human microglia states are conserved across experimental models and regulate neural stem cell responses in chimeric organoids. Cell Stem Cell. 28(12):2153-2166.e6. (Paper)

  13. Reikersdorfer KN, Stacy AK, Bressler DA, Hayashi LS, Hengen KB, Van Hooser SD (2021). Construction and implementation of carbon fiber microelectrodes for acute and chronic in vivo recordings. JOVE DOI: 10.3791/62760. (Video)

  14. Wu YK, Hengen KB, Turrigiano GG, Gjorgjieva J (2020). Homeostatic Mechanisms Regulate Distinct Aspects of Cortical Circuit Dynamics. Proc Natl Acad Sci U S A. 201918368; DOI: 10.1073/pnas.1918368117 (Paper)

  15. Tatavarty V, Torrado Pacheco A, Groves Kuhnle C, Lin H, Koundinya P, Miska NJ, Hengen KB, Wagner FF, Van Hooser SD, Turrigiano GG (2020). Autism-Associated Shank3 Is Essential for Homeostatic Compensation in Rodent V1. Neuron. 106(5):769-777. (Paper)

  16. Brunwasser SJ, Hengen KB. (2020). Currently unstable: daily ups and downs in E-I balance. Neuron. 2020 Feb 19; 105 (4): 589-91. (Paper)

  17. Ma Z, Turrigiano GG, Wessel R, Hengen KB. (2019). Cortical Circuit Dynamics Are Homeostatically Tuned to Criticality In Vivo. Neuron. 104(4):655-664. (Paper)

  18. Torrado Pacheco A, Tilden EI, Gruztner SM, Lane B, Wu Y, Hengen KB, Gjorgjieva J, Turrigiano GG, (2019). Rapid and Active Stabilization of Visual Cortical Firing Rates Across Light-Dark Transitions. Proc Natl Acad Sci U S A. 116(36),pii: 201906595. (Paper)

  19. Hengen KB, Torrado Pacheco A, McGregor JN, Van Hooser SD, Turrigiano GG (2016). Neuronal firing rate homeostasis is inhibited by sleep and promoted by wake. Cell, 2016 Mar 24;165(1):180-91. (Paper)

  20. Hengen KB, Lambo ME, Van Hooser SD, Katz DB, Turrigiano GG (2013). Firing rate homeostasis in visual cortex of freely behaving rodents. Neuron. 80(2):335-42. (Paper)